Genomics and Spatial Biology CoLab

Overview of Services

Welcome to the Seattle Children's Research Institute's Genomics and Spatial Biology Collaborative Laboratory (CoLab), an institutional resource to enable efficient and equitable access to state-of-the-art scientific equipment and expertise to advance collaborative, cutting-edge pediatric research.

The CoLab has the following platforms available for your genomics, single cell, and spatial needs:

  • PacBio Revio Long Read Sequencer
  • Illumina NextSeq 2000*
  • Agilent 4200 TapeStation*
  • Agilent Femto Pulse
  • 10x Genomics Chromium X*
  • Nanostring CosMX SMI
  • Nanostring GeoMX DSI
  • Nanostring nCounter
  • MissionBio Tapestri single cell

*Available for independent use to trained users

We provide end-to-end workflows for CosMx & GeoMx and an expanding list of library prep services for both Illumina and PacBio sequencing. In addition, we offer consultations, grant support, & methods development/drafting for services performed by the CoLab.

For grant review, methods drafting, or custom protocols/preparations not listed under our services tab, please request a consult. The CoLab is happy to help plan & execute novel protocols.

 

Staff

Rebecca Martin, Ph.D.
Research Scientist IV - Supervisor               
rebecca.martin@seattlechildrens.org 
Nasaro Kim, MS, MB(ASCP)
Research Scientist II                 
nasaro.kim@seattlechildrens.org 

Location and hours of operation

Hours Location

Monday - Friday 

8:30AM - 4:30PM 

Rooms 770 and 767

Jack MacDonald Building (JMB)

Seattle, WA 98101

Links and Resources

Genomics & Spatial Biology CoLab Homepage: https://child.seattlechildrens.org/research/core_services/genomics-and-spatial-biology-colab/

Illumina NextSeq 2000 Specifications: https://www.illumina.com/systems/sequencing-platforms/nextseq-1000-2000/specifications.html 

Illumina Coverage Calculator: https://support.illumina.com/downloads/sequencing_coverage_calculator.html


  

Contacts

Name Role Phone Email Location
Rebecca Martin, Ph.D.
Research Scientist IV - Supervisor
 

 
genomicsandspatialbiology@seattlechildrens.org
 
JMB 720
 
Nasaro Kim, MS, MB(ASCP)
Research Scientist II
 

 
genomicsandspatialbiology@seattlechildrens.org
 
JMB 720
 
Ginny Hoglund Schultz
Research Lab Supervisor
 

 
ginny.hoglund@seattlechildrens.org
 

 

Service list


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